Streamline parsing

Whether you prefer using it as a library within your Python projects, via a command-line interface (CLI) for quick tasks, or in a containerized environment (Podman/Docker) for scalability and portability, our parser fits seamlessly into your workflow.

Database export

Seamlessly export parsed data into relational databases, ensuring a normalized data representation that's ready for analysis and integration with your existing systems.

Extensible architecture

Our parser is designed with extensibility in mind. You can create custom plugins for enhanced formatting, parsing, and processing tailored to your specific needs

Open source

Embrace flexibility and transparency with our parser's source code, available under the permissive MIT license. Modify, customize, and contribute to the project with confidence

Quick Start: Installation

1. Pip (Python)
# pip & virtualenv
pip install git+https://hiplab.mc.vanderbilt.edu/git/hiplab/parser.git

# CLI runner/executable
healthcare-io [init|parse|export] --help
2. Docker/Podman
# clone repository (Dockerfile)
git clone https://healthcareio.the-phi.com/git/code/podman-parser.git

# build docker/podman image
docker build -t healthcareio:0.1 .

# build container
docker container create -v:/data -p::5000 -h parser-ui --env-file ./env.sh --name parser healthcareio:0.1